How are Vaccines Assessed in Clinical Trials?


The vaccine testing paradigm

Advances in biotechnology and knowledge of ways to enhance immune responses and immunologic memory have revolutionized the field of human vaccine development, resulting in a vaccine “pipeline” that in recent decades has led to the licensure of many new and improved vaccines. However, a candidate vaccine faces a long, arduous, and expensive road, replete with obstacles, as it commences the journey toward becoming a licensed product that can protect individuals from disease and serve as a public health tool. The step-wise process that involves a series of sequential clinical vaccine studies that must be properly executed to advance a vaccine candidate, incrementally, toward licensure is based on proof of the vaccine’s safety, immunogenicity, and efficacy in target populations, and is divided into “Phases”. The early phases of the vaccine clinical testing paradigm are associated with the highest risk of failure and consequently the vaccine pipeline rather more resembles a funnel in which many products enter into Phase 1 but the winnowing of candidates results in fewer advancing to Phase 2, even fewer to Phase 3 and only a handful achieving licensure. Thus, the chance of success for a vaccine candidate to become a licensed product and thereupon a potential public health tool increases as each phase in the vaccine development paradigm is successfully achieved. In general, in industrialized countries where mortality from infectious diseases is low and age expectancy is high, safety is the key parameter of selection. For vaccines largely targeted for populations in developing countries where young child mortality remains high and morbidity from infectious diseases remains an important public health burden, a somewhat different risk:benefit ratio operates such that efficacy in preventing the target disease is key and milder forms of adverse reactions can be tolerated if accompanied by high efficacy.

Phase 1 trials undertake the initial careful assessment of the safety and clinical acceptability of the candidate vaccine in small numbers of healthy individuals (usually tens or scores of subjects). Such early dose/response tests can only detect common adverse reactions (some of which may be unacceptable) and provide an initial glimpse of whether relevant immune responses can be generated.

Phase 2 trials evaluate the candidate vaccine in increasingly larger numbers of subjects (typically hundreds) and are usually placebo-controlled to measure better the rate of adverse reactions versus background rates of symptoms and complaints. The level of shedding of a live viral or bacterial vaccine is intensively examined in Phase 2 trials, as is the propensity of the live vaccine to be transmitted to household contacts and to survive in the environment. For vaccines that will ultimately be used in infants and toddlers, Phase 1 and 2 trials must be undertaken in progressively younger subjects (age deescalation) until the target age group is reached. The immunization schedule and dose of vaccine to be used in a Phase 3 trial is identified in Phase 2 trials.

A vaccine candidate that has proven to be well tolerated in Phase 2 trials involving hundreds of persons of the target population group (and often in participants in several different geographic sites to document broad relevance) can progress to evaluations of the vaccine’s efficacy in preventing disease. Assessments of efficacy in large-scale Phase 3 trials whenever possible follow a randomized, placebo-controlled (or active agent-controlled), double-blind design. Large clinical trials must also document that different lots of the vaccine have been manufactured in a consistent manner such that the clinical tolerability and immune responses elicited by three different lots of vaccine are similar. These important large safety/immunogenicity studies are termed “lot consistency” trials.

When sufficient evidence of the vaccine’s safety, ability to elicit relevant immune responses and efficacy in preventing disease has been assembled and there is documentation of consistent manufacture of the vaccine in an approved manufacturing establishment, a Biologics License Application (BLA) can be submitted for review by a national regulatory agency such as the US Food and Drug Administration (FDA). If approved, the vaccine will become licensed.

The clinical trials that assess the vaccine at each Phase of development are performed according to clinical protocols that must undergo prior review by ethics committees [called Institutional Review Boards (IRBs) in the USA] and particular attention is paid to the informed consent methods and the documentation of informed consent. Moreover, before a clinical trial of a new vaccine can be initiated, a submission must be made to the national regulatory agency (eg, the US FDA) where the clinical protocol and detailed information about the vaccine, its components, method of manufacture, formulation, results of prior animal tests and animal toxicology tests, and other relevant information are included. In the United States such submissions to the Center for Biologics Evaluation and Research of the FDA are in the form of a New Drug Application (IND). The FDA has up to 30 days to review an IND and to request additional information and clarifications or to request modifications. Sometimes the request for modifications or collection of additional information does not delay initiation of the clinical trial. However, should the FDA have substantial concerns about some aspect of the proposed vaccine trial, the FDA can apply a “clinical hold” that prevents the clinical trial from commencing until it receives satisfactory responses that address the concerns raised; at that point if the concerns have been addressed, approval will be given to initiate the clinical trial. If 30 days pass after the FDA-confirmed date of submission of an IND and no comment has been forthcoming, investigators may initiate the clinical trial.

Certain clinical trials, such as any Phase 2 or Phase 3 vaccine trial in the United States and Phase 1 pediatric vaccine trials within the European Union, must be registered in a clinical trials registry. The International Committee of Medical Journal Editors requests that all clinical trials of products be registered. Examples of clinical trials registries include ClinicalTrials.gov (maintained by the National Library of Medicine, Bethesda, MD, USA), the Pan African Clinical Trials Registry [( www.pactr.org ) managed by the South African Cochrane Centre at the South African Medical Research Council], and the European Union Clinical Trials Register. Registration of clinical trials increases transparency for the general public (who can access the websites) as well as for health professionals. It allows interested parties and stakeholders to assess rapidly the landscape of trials ongoing with particular types of vaccines. It also allows the contents of scientific publications about a vaccine to be compared with what was proposed to be studied in the summary of the clinical trial contained in the register.

The stepwise process vaccine development paradigm continues even after a vaccine becomes licensed, as there must be a post-licensure surveillance plan to monitor the safety profile of the newly licensed vaccine and its impact on the target disease once it is in large-scale use. Only post-licensure, when very large numbers of individuals of the target population have received the vaccine in numbers far exceeding the numbers of participants in Phase 3 trials does one have the possibility through Phase 4 surveillance to detect rare but severe adverse events. Similarly, Phase 4 post-licensure trials and surveillance methods of different types allow an evaluation of how the vaccine is protecting under real-life conditions and constraints.

Ethical issues

Ethical Committees such as the IRBs in the United States are responsible for overseeing the health and satisfactory clinical condition of participants involved in clinical trials. US regulations instruct that the board includes at least five members, at least one who is not a scientist, and one who is not affiliated with the institution. The IRB reviews protocols, investigator’s brochures, consent forms, recruiting materials, and additional safety information.

WHO guidance recommends that Ethics Committee members should include individuals with relevant scientific knowledge, expertise in legal matters and/or ethics and lay people whose primary role is to share their insights about the communities from which participants are likely to be drawn. To enhance independence, WHO suggests that the Research Ethics Committee should include members who are not affiliated with organizations that sponsor, fund, or conduct research reviewed by the Research Ethics Committee. Since committees should be large enough to ensure that multiple perspectives are brought into the discussion, quorum requirements provide that at least five people, including at least one lay member and one nonaffiliated member, be present to make decisions about the proposed research.

Good Clinical Practices

Good Clinical Practices, “GCP”, refers to the comprehensive regulations and guidelines for conducting clinical trials that must be followed for results of those trials to be contained within an application requesting licensure of the vaccine. GCP covers items such as protocol design, informed consent, record keeping, data reporting, laboratory standard operating procedures (SOPs), adverse event reporting, among others. GCP is intended to assure the integrity and quality of clinical data and to protect the rights and safety of study participants.

Phase 1

If the vaccine candidate is based on a technology that has been previously utilized to make other vaccines that ultimately proved to be safe, immunogenic, and efficacious, that generally facilitates the initiation of Phase 1 trials and allows them to be performed at an accelerated pace. For example, conjugate vaccines consisting of polysaccharides from pathogenic bacteria covalently linked to carrier proteins have led to multiple successful vaccines including several Haemophilus influenzae type b (Hib) conjugates (Hib capsular polysaccharide linked to tetanus toxoid, CRM 197 genetically detoxified mutant diphtheria toxin, or outer membrane protein of Group B Neisseria meningitidis ), multivalent pneumococcal conjugate vaccines (capsular polysaccharides of 10 or 13 serotypes of Streptococcus pneumoniae linked to carrier protein), quadrivalent meningococcal conjugate vaccine (capsular polysaccharides of Neisseria meningitidis Group A, C, W135, and Y linked to carrier protein) have all proven to be well-tolerated, immunogenic, and efficacious vaccines in children, including young infants. Thus, a new bivalent conjugate vaccine to prevent invasive disease due to nontyphoidal Salmonella should be able to enter Phase 1 clinical trials and progress through stepwise age deescalation to infants without generating undue anxiety.

Certain target populations and types of vaccines require that they be evaluated in Phase 1 clinical trials of special design and performed with caution. Examples are given later:

Highly Vulnerable Target Populations

Studies of vaccines in infants generally require Phase 1 designs that assess the vaccine in two or three older pediatric age groups before initiating the evaluation in infants. Pregnant women are regarded as another vulnerable subpopulation, as vaccines will need to be shown to be safe for both the pregnant woman and her developing fetus.

Live Viral and Bacterial Vaccines

The issue with Phase 1 trials of live viral and bacterial vaccines, particularly ones administered via mucosal (oral or nasal) routes is that they may be shed or excreted and may therefore pose a theoretical risk for contacts, including vulnerable hosts such as young infants and pregnant women. As such, the initial Phase 1 trials of live oral enteric vaccines are often carried out under physical containment on research isolation wards where the potential for transmission from vaccinees to contacts (who received placebo) can be evaluated.

Impeded Vaccines

Certain vaccines that are needed to address well recognized public health disease burdens have garnered insufficient support for clinical development because of unexpected severe untoward reactions that occurred in the testing of early candidates of these types of vaccines. Such vaccines can be referred to as impeded vaccines. Two examples are vaccines against respiratory syncytial virus (RSV) and group A Streptoccoccus pyogenes . In the 1960s, a formalin-inactivated RSV vaccine tested in randomized controlled trials to assess efficacy was found to cause more severe disease when vaccinees were exposed to RSV than when controls were exposed. This phenomenon, which resulted in more hospitalizations for RSV disease and more deaths among vaccinees than among controls, dampened the interest of vaccine industry in supporting clinical trials of new generations of candidate RSV vaccines. A similar situation existed for Group A S. pyogenes vaccines and there was even an admonition in the Code of Federal Regulations instructing that vaccines based on products from Group A S. pyogenes should not be administered to humans. Thus, subsequent Phase 1 trials with RSV and Group A S. pyogenes vaccines have had to be carried out under notably intensive clinical surveillance and regulatory oversight.

Unusual Vaccines

Occasionally investigators seek to undertake a Phase 1 trial of a vaccine that is so unusual that it proves challenging from the regulatory perspective. One example was the first Phase 1 trial of a transgenic plant vaccine in the United States in which a gene encoding a protein (B subunit of Escherichia coli heat-labile enterotoxin), considered capable of eliciting a potentially protective immune response, was expressed in an edible plant. Since testing of such a product fell between the remits of two different federal regulatory agencies, the FDA and the Department of Agriculture, a pioneering regulatory path had to be worked out.

Public Health Emergency

Occasionally, an infectious disease emerges that is highly infectious, causes severe or fatal disease and a vaccine is sought because there is no specific therapy. In such a situation compelling pressure is exerted to initiate and complete those vaccine trials as expeditiously as possible. Such was the situation in 2014 with two candidate Ebola vaccines, one of which had previously only been administered to two humans and the other had not as yet been given to any human. Without bypassing any steps, the Phase 1 trials of these vaccines were initiated and completed with historic speed, demonstrating that, as necessary, in the face of a public health emergency the usual time necessary to evaluate a vaccine can be drastically reduced. If initial Phase 1 trials of a new vaccine are carried out in an industrialized country and are then repeated in a developing country population, the latter trials are sometimes referred to as Phase 1b trials.

Phase 2

The Phase 2 vaccine trials that pave the way for pivotal Phase 3 field trials that assess the efficacy of a vaccine, are typically less visible than the latter. Ideally the sites and populations for Phase 2 trials will be representative of the ultimate target population. However, for various reasons, sometimes Phase 2 and 3 trials are carried out in parallel in other populations. During Phase 2 trials, it is important to select and validate the assays that measure immune response(s) to the vaccine. It is also critical that before the Phase 2 trials begin (or as soon as possible after they begin), the final method of manufacture and the formulation be finalized as this is what must be utilized in the future pivotal Phase 3 efficacy trial and will be commercialized for post-licensure use.

Harmony with Existing Immunization Schedules

Most new vaccines, whether they require administration of only a single dose, or must be given as multiple spaced doses, will have to fit into existing immunization schedules for the target population. This is relevant for infants and toddlers, adolescents, the elderly, and vaccines used in mass immunization campaigns. This key feature of Phase 2 trials addresses the need to harmonize the new vaccine’s immunization schedule to be compatible with its being concomitantly administered when other vaccines are already scheduled to be given. Particularly for parenteral vaccines that must be administered to infants and toddlers, the immunization schedules in both industrialized countries and in developing countries are already quite “crowded”.

Compatibility with Concomitantly Administered Vaccines

Once an immunization regimen is selected and harmonized to fit within the visits of an existing immunization schedule, Phase 2 trials must also document that the new vaccine, be it delivered by the parenteral, oral or nasal (or other) route, does not significantly diminish the immune response to any other vaccine administered at the same time, whatever the route, nor does it significantly increase the occurrence of adverse reactions. Similarly, it must be documented that the concomitantly administered, already licensed, routine immunizations do not diminish the immune responses to the candidate new vaccine. Phase 2 trials that address these questions are often complex with multiple study groups, require many participants, and are expensive, particularly for new vaccines that are targeted for an already crowded infant immunization schedule.

For candidate new vaccines that must be administered by parenteral administration, one can readily see the theoretical desirability of creating combination vaccines wherein a new antigen (ie, vaccine) is formulated along with existing vaccines or vaccine combinations. While desirable, many hurdles make this difficult, aside from the complexity of the Phase 2 trials required to test the compatibility of new combinations. For example, the manufacturer of a candidate new vaccine that is keen to incorporate into a combination with other vaccines must either already be the manufacturer of those vaccines or must partner with other manufacturers to try and achieve that goal.

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