Escherichia Coli Enteric Infections


Definition

Bacteria belonging to the species Escherichia coli are a normal component of the intestinal microbiota ( Chapter 257 ). The majority of E. coli are harmless commensals, but specific isolates have acquired pathogenicity genes that enable them to cause diseases, including urinary tract infections, bacteremia, meningitis, and diarrheal illness. One particular challenge to the clinician and microbiology laboratory is how to distinguish these pathogenic E. coli from harmless commensal strains so as to better guide diagnosis and treatment.

Virulence traits include a variety of toxins, adherence factors, and secreted mediators that work together to perturb the host’s intestinal physiology. Specific combinations of these factors produce six major pathotypes of diarrheagenic E. coli : enterotoxigenic, enteroinvasive, enterohemorrhagic, enteropathogenic, enteroaggregative, and diffusely adherent. In addition, these pathotypes frequently overlap, thereby leading to “hybrid” or “heteropathogenic” strains. Atypical strains also may carry partial genetic signatures of one or a combination of pathotypes. For example, E. coli that express Shiga-like toxins characteristic of enterohemorrhagic E. coli without the usual associated adherence factors are now collectively known as shigatoxigenic E. coli . Strains that carry more virulence genes are more strongly associated with diarrhea.

The Pathogen

E. coli is a small catalase-positive, oxidase-negative, gram-negative bacillus in the family Enterobacteriaceae. E. coli is the predominant member of the Gammaproteobacteria in the intestinal tract of humans and other mammals, although it is greatly outnumbered by members of other bacterial phyla, which largely consist of strict anaerobes.

E. coli possess a complex envelope that consists of a plasma membrane, a peptidoglycan cell wall, and an outer membrane. The microorganism’s outer membrane confers mechanical properties of stiffness and strength. The lipopolysaccharide cell wall of E. coli contains immunostimulatory lipid A attached to a core oligosaccharide chain. Most E. coli have immunogenic carbohydrate chains, known as O antigens, attached to this core glycolipid to produce over 170 O serogroups. E. coli also have at least 56 distinct flagellar (H) antigens based on variable domains of the flagellin gene. Some 80 variably heat-labile capsular (K) antigens have also been described.

E. coli are major components of the normal gut microbiota, but diarrheagenic E. coli differ from these commensals in their specific abilities to cause clinically meaningful infection in the gut. These pathogens seldom spread systemically, but they share virulence traits with extraintestinal pathogenic E. coli and uropathogenic E. coli , although these latter organisms are typically hybrid strains as opposed to classic diarrheagenic strains. Numerous adherence, enterotoxic, cytotoxic, and invasiveness factors may be gained or lost by a particular serotype because they are characteristically encoded on transmissible genetic elements such as plasmids or bacteriophages. These factors convey the pathotype of disease because they allow colonization and perturbation of host intestinal physiology. Molecular analysis shows that commensal and pathogenic E. coli cluster into phylogenetic groups that are independent of O:H serotype. Moreover, the E. coli taxon now also includes Shigella , based on genomic identity, although the latter can still be distinguished biochemically. Nevertheless, relatively few O serogroups tend to predominate in the normal human colon (O groups 1, 2, 4, 6, 7, 8, 18, 25, 45, 75, and 81), whereas others tend to be associated with specific virulence traits and thus different types of pathogenesis in the intestine.

Epidemiology

Enteric E. coli infections are acquired by the fecal-oral route, although the fecal sources and infectivity differ among the pathotypes. From the host perspective, the most important risk factors for illness due to diarrheagenic E. coli include young age and residence in or travel to low-income areas of the world where water purification is challenging. Nevertheless, E. coli is among the leading causes of hospitalization for acute gastroenteritis in the United States along with norovirus ( Chapter 350 ) and Salmonella ( Chapter 284 ). Other host risk factors for diarrheogenic E. coli infection include recent use of antibiotics and loss of gastric acid. In addition, specific single-nucleotide polymorphisms in several human genes encoding inflammatory mediators are associated with traveler’s diarrhea caused by enterotoxigenic E. coli , enteroaggregative E. coli , or both. Interestingly, nonenteric travel-acquired E. coli strains rarely cause clinical disease.

The advent of molecular diagnostics has expanded the understanding of diarrheagenic E. coli by identifying specific genes that characterize individual pathotypes. This information can be useful for an individual patient as well as for studying outbreaks of diarrhea.

Enteropathogenic and Enterotoxigenic Strains

A human reservoir is probably required for most recognized types of enteropathogenic E. coli and enterotoxigenic E. coli , but domestic dogs and cats can also harbor human pathogenic strains. The infectious dose of enterotoxigenic E. coli in volunteers is 10 6 to 10 10 organisms, thereby indicating that the organism usually must multiply in contaminated food or water for its effective transmission and that spread directly from person to person is unusual, except in rare outbreaks in newborn nurseries. Heavy contamination with enterotoxigenic E. coli has been documented in foods prepared in homes, restaurants, and by street vendors, as well as in drinking water in many tropical areas. Contaminated water and food represent the major sources of human enterotoxigenic E. coli infection, primarily in warm or wet seasons.

As with most diarrheal illnesses, the highest age-specific attack rates of enterotoxigenic E. coli are found in young children, in whom enterotoxigenic E. coli account for anywhere from 3 to 39% (average, 13%) of acute diarrheal illnesses. As for immunologically inexperienced young children, a traveler visiting tropical areas has a 30 to 50% chance of acquiring traveler’s diarrhea ( Chapters 262 and 265 ) during a 2- to 3-week stay unless they avoid untreated water or ice and uncooked foods such as salads. The most commonly identified pathogen associated with diarrhea in most studies of travelers to tropical areas of the world is enterotoxigenic E. coli . A close second is enteroaggregative E. coli .

Typical enteropathogenic E. coli strains have been recognized primarily in poor urban areas. “Atypical” enteropathogenic E. coli strains, which possess the locus of enterocyte effacement but not the bundle-forming pilus gene, predominate in developed areas but can be found in developing areas as well. Enteropathogenic strains remain a common pathogen, and “typical” enteropathogenic E. coli are still generally associated with diarrhea rather than asymptomatic colonization.

Enteroaggregative Strains

The natural reservoir of enteroaggregative E. coli is not known, but outbreaks have been traced to contaminated food, and live organisms can be found in drinking water, table salsa, and other consumable items in endemic tropical areas. A high infectious dose is required for acquisition, but person-to-person transmission can occur among men who have sex with men. In addition to its role in traveler’s diarrhea, enteroaggregative E. coli is an important cause of both acute and persistent diarrhea, as well as malnutrition ( Chapter 197 ), especially in children in tropical areas and in patients with HIV/AIDS ( Chapter 358 ). It also is a major cause of sporadic diarrhea in the United States, Europe, China, and other developed areas.

Diffusely Adherent Strains

Diffusely adherent E. coli remain the least well-understood pathotype and have not consistently been found more often in patients with diarrhea than in controls, except for acute diarrhea in children in developing areas. Part of the difficulty is the heterogeneity of strains, some of which express different types of adhesins and different groups of virulence traits, thereby leading to inconsistent pathogenicity.

Enterohemorrhagic Strains

Enterohemorrhagic E. coli frequently colonize commercial livestock but do not infect them. Enterohemorrhagic E. coli (O157:H7 and others) infections can be caused by undercooked hamburgers, but large outbreaks have also been associated with contamination of the domestic water supply, unpasteurized apple juice, spinach, seed sprouts, flour, and other vegetable items such as lettuce and tomatoes. ,

Unlike enterotoxigenic strains, transmission requires only a low infectious dose of enterohemorrhagic E. coli O157:H7, so person-to-person spread can lead to secondary cases. Secondary cases of shigatoxigenic/enteroaggregative E. coli O104:H4 may have occured but appear to be very rare. Enterohemorrhagic E. coli and shigatoxigenic E. coli infections are especially alarming because of the risk of hemolytic-uremic syndrome ( Chapter 158 ).

Enteroinvasive Strains

Limited data on enteroinvasive E. coli suggest that infectious doses are relatively high, but adequate numbers of organisms can readily be spread in food with high attack rates in outbreak situations. This characteristic distinguishes enteroinvasive E. coli epidemiologically from Shigella ( Chapter 285 ), which is easily spread person-to-person as well as by contaminated food and water.

Pathobiology

Enteric infections caused by E. coli may involve the small intestine, colon, or both, depending on the organism’s genetic codes for virulence traits. Well-established mechanisms of pathogenesis of E. coli enteric diseases include secretion of enterotoxins (enterotoxigenic E. coli ), tissue invasion leading to cell death ( Shigella and enteroinvasive E. coli ), and epithelial necrosis when Shiga-like toxins (Stx1/Stx2) cause food-borne hemorrhagic colitis (enterohemorrhagic E. coli and shigatoxigenic E. coli ) (see Table 280-1 ). By comparison, the classically recognized enteropathogenic E. coli are neither enterotoxigenic per se nor invasive, but rather use a specialized apparatus called a type III secretion system to inject protein “effectors” directly into host cells, thereby allowing them to attach to and efface the epithelium and leading to formation of epithelial pedestals with intimately adherent bacteria. Specific gene clusters and increasing copy numbers of the locus of enterocyte effacement eae gene may characterize diarrheagenic strains compared with nonpathogenic colonizers. Still other types of diarrheagenic E. coli can also exhibit aggregating (enteroaggregative E. coli ) or diffuse adherence (diffusely adherent E. coli ) to epithelial cells.

TABLE 280-1
DIFFERENT TYPES OF ENTERIC ESCHERICHIA COLI INFECTIONS
TYPE MECHANISM DETECTION CLINICAL SYNDROMES
ENTEROPATHOGENIC E. COLI
Typical enteropathogenic Attach then efface the mucosa by injecting virulence factors via the type III secretion system Gene probe or PCR for eae and bfpA; serotype, focal HeLa cell adhesion, pedestal formation Infantile diarrhea in developing areas
Atypical enteropathogenic Attach and efface but different microcolony formation Gene probe or PCR for eae ; cell adherence (variable) Infantile and animal diarrhea in developed areas
ENTEROTOXIGENIC E. COLI
Heat-labile toxin (LT) Activates intestinal adenylate cyclase Gene probe, PCR for LT Watery diarrhea, traveler’s diarrhea
Heat-stable toxin (STa: STh or STp) Activates intestinal guanylate cyclase PCR; EIA, suckling mice, 6-hour ileal loop assay, gene probes Watery diarrhea, traveler’s diarrhea
ENTEROAGGREGATIVE E. COLI
Colonize in aggregates by unique fimbriae; SPATE toxins, mucinase, biofilm, type VI secretion system PCR for aggR and aatA ; aggregative adherence to cells or strata; AA gene probe; biofilm formation Endemic persistent diarrhea, acute traveler’s diarrhea, sporadic acute diarrhea
DIFFUSELY ADHERENT E. COLI
Colonize (e.g., F1845 afimbriate adhesin); SPATE toxins, and type III secretion system in some isolates Gene probe/PCR; HeLa cell adherence Persistent diarrhea in children >18 months old
SHIGATOXIGENIC E. COLI
Enterohemorrhagic Shiga-like toxins and attaching/effacing ability via type III secretion system PCR or EIA for Stx1/2, serotype, cell adhesion with pedestal formation; Vero cell cytotoxicity; sorbitol agar; PCR for eae Hemorrhagic colitis (afebrile, bloody diarrhea); HUS in some cases
Non-enterohemorrhagic Shiga-like toxins, only without attaching/effacing; may carry other virulence phenotypes PCR or Stx EIA; negative for eae Hemorrhagic colitis, HUS, or benign watery diarrhea
ENTEROINVASIVE E. COLI
Cell invasion and spread PCR for ipaH; Sereny test, gene probe Inflammatory dysentery
AA = aggregative adherence; DA = diffuse adherence; EAST = heat-stable toxin; EIA = enzyme immunoassay; HUS = hemolytic-uremic syndrome; LT = heat-labile; PCR = polymerase chain reaction; SPATE = serine protease autotransporter of Enterobacteriaceae.

The pathogenesis of enteric E. coli infection begins with ingestion of the organism. It then faces the normal gastric acid barrier. Both enterotoxigenic E. coli and enteroinvasive E. coli appear to be sensitive to gastric acid, which increases the infectious dose by 100- to 1000-fold. Even though enterohemorrhagic E. coli expresses acid tolerance factors that may facilitate its survival in the stomach, hypochlorhydria is a risk factor for hemolytic-uremic syndrome. After ingestion and passage through the stomach, enteric E. coli colonize the involved part of the intestinal tract using specialized adhesins and the coordinated expression of virulence traits. The result is the production of toxins, intracellular invasion, or other disruptions of host cell physiology.

Enteropathogenic E. coli

Typical enteropathogenic E. coli strains express plasmid-encoded genes that confer localized adherence to epithelial cells (through specialized bundle-forming pili) and chromosomal genes that mediate attachment and effacement of microvilli. The latter is characterized by the formation of cellular pedestals that hold the bacteria intimately to the cell surface. These changes in the host epithelia are mediated by protein effectors injected directly into host cells by a specialized type III secretion system encoded on the chromosomal locus of enterocyte effacement. These secreted effectors cause cellular changes that lead to villous atrophy, mucosal thinning, inflammation in the lamina propria, and variable hyperplasia of crypt cells. These morphologic changes are associated with a reduction in mucosal brush border enzymes and may contribute to the impaired absorptive function and diarrhea. Atypical enteropathogenic E. coli strains are generally defined as strains that express the locus of enterocyte effacement but not the bundle-forming pili; they maintain the ability to attach/efface and cause epithelial injury.

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